BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB009E07LP1|AL426048
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1040 1580 0.0
>3x_Contig1040
Length = 3420
Score = 1580 bits (797), Expect = 0.0
Identities = 806/809 (99%)
Strand = Plus / Minus
Query: 1 gatcttatattgtgttgtcttaaagatgaaagaataggacaagaacgaaattgtagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2522 gatcttatattgtgttgtcttaaagatgaaagaataggacaagaacgaaattgtagctgc 2463
Query: 61 cagtataattacagagtaccatgatattaattgctcctggtgtagatgcgtatgatgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2462 cagtataattacagagtaccatgatattaattgctcctggtgtagatgcgtatgatgtga 2403
Query: 121 gtggggtatcgtctggttaatttcttcgtgatgatcagcagtagaactttctgcgaatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2402 gtggggtatcgtctggttaatttcttcgtgatgatcagcagtagaactttctgcgaatag 2343
Query: 181 aacggctatttcttctagcacatgaaatatcaaatctaaaccagcaaaacaaatcgagat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2342 aacggctatttcttctagcacatgaaatatcaaatctaaaccagcaaaacaaatcgagat 2283
Query: 241 tgcaaaagcaaatgacaacaatacatcaattctgttcaagccgaacggcagagttatcgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2282 tgcaaaagcaaatgacaacaatacatcaattctgttcaagccgaacggcagagttatcgt 2223
Query: 301 tcctgttttccagatttcgaacttagctaaaagctctgttaaaatggcaaagataccacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2222 tcctgttttccagatttcgaacttagctaaaagctctgttaaaatggcaaagataccacc 2163
Query: 361 aagaacatcatacgtgagggaatgacacaacgttccgagtaagttccatcccttctgatg 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 2162 aagaacatcatacgtgaggaaatgacacaacgttccgagtaagttccatcccttctgatg 2103
Query: 421 ccctaggttgaaaatgaatatcgatatcagaagttcaacgatgcagattgaaatttggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2102 ccctaggttgaaaatgaatatcgatatcagaagttcaacgatgcagattgaaatttggat 2043
Query: 481 atgtgttaatggccacgtcaagttatttctgagatctttgaaatccggtactggtaatga 540
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2042 atgtgtcaatggccacgtcaagttatttctgagatctttgaaatccggtactggtaatga 1983
Query: 541 ctttataatatttaacggttccttaacctcaggttcttggaagaagttcatggaaacaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1982 ctttataatatttaacggttccttaacctcaggttcttggaagaagttcatggaaacaga 1923
Query: 601 agagtgtttatatctgtggcccttacgaaacatggcgcttcgactacccccattagtacc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1922 agagtgtttatatctgtggcccttacgaaacatggcgcttcgactacccccattagtacc 1863
Query: 661 accactactgggtcccgagttattggaagagccagatagcggaggcggttgttatgcgga 720
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1862 accactactgggtcccgagttattggaagagccagatagcggaggcggttgtaatgcgga 1803
Query: 721 ggagctgaaattgaaaggagcctcgaacaacagtgaattcctcttacttttcctttctgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1802 ggagctgaaattgaaaggagcctcgaacaacagtgaattcctcttacttttcctttctgg 1743
Query: 781 tgatggggatctgttatgccttactggtg 809
|||||||||||||||||||||||||||||
Sbjct: 1742 tgatggggatctgttatgccttactggtg 1714
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6101
Number of Sequences: 1807
Number of extensions: 6101
Number of successful extensions: 34
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)